Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim55G3X8Y1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim55G3X8Y1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.03■□□□□ 0.32
Trim55G3X8Y1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Sybu-209ENSMUST00000228639 4113 ntBASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Gm5874-201ENSMUST00000096101 508 ntBASIC17.02■□□□□ 0.32
Trim55G3X8Y1 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim55G3X8Y1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trim55G3X8Y1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Trim55G3X8Y1 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim55G3X8Y1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trim55G3X8Y1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim55G3X8Y1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17■□□□□ 0.31
Trim55G3X8Y1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trim55G3X8Y1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Gm37736-201ENSMUST00000193564 2802 ntBASIC17■□□□□ 0.31
Trim55G3X8Y1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Trim55G3X8Y1 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim55G3X8Y1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
Trim55G3X8Y1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trim55G3X8Y1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trim55G3X8Y1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim55G3X8Y1 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17■□□□□ 0.31
Trim55G3X8Y1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.99■□□□□ 0.31
Trim55G3X8Y1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.99■□□□□ 0.31
Trim55G3X8Y1 Gm38205-201ENSMUST00000192243 258 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms