Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdh9F8VPK8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdh9F8VPK8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Gm27463-201ENSMUST00000183569 57 ntBASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Gm5417-201ENSMUST00000079706 384 ntBASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdh9F8VPK8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Gm37055-201ENSMUST00000191866 133 ntBASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdh9F8VPK8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Pcdh9F8VPK8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh9F8VPK8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh9F8VPK8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh9F8VPK8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdh9F8VPK8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdh9F8VPK8 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms