Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Gm12527-201ENSMUST00000117967 564 ntBASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdh1F7BJK1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdh1F7BJK1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Gm20760-201ENSMUST00000179197 648 ntBASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Il3ra-202ENSMUST00000223589 738 ntBASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.86□□□□□ -0.03
Pcdh1F7BJK1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdh1F7BJK1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdh1F7BJK1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms