Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pcdh11xF6ZNL5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Gm26039-201ENSMUST00000158152 144 ntBASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pcdh11xF6ZNL5 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Gm29707-201ENSMUST00000196325 491 ntBASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Gm21362-201ENSMUST00000194272 928 ntBASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdh11xF6ZNL5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdh11xF6ZNL5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdh11xF6ZNL5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdh11xF6ZNL5 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms