Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Gm12887B1AVM1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Gm12887B1AVM1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Gm7290-201ENSMUST00000104990 617 ntBASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Gm12918-201ENSMUST00000120234 636 ntBASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Gm15710-201ENSMUST00000121821 636 ntBASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Gm5075-201ENSMUST00000196916 622 ntBASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Gm10138-203ENSMUST00000206952 366 ntBASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Gm12887B1AVM1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Prob1-201ENSMUST00000097619 3021 ntBASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gm12887B1AVM1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms