Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.25■□□□□ 0.35
Scn1aA2APX8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.24■□□□□ 0.35
Scn1aA2APX8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn1aA2APX8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44357-201ENSMUST00000195897 142 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm19658-201ENSMUST00000196231 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44367-201ENSMUST00000196836 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44350-201ENSMUST00000197197 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44390-201ENSMUST00000197533 144 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44313-201ENSMUST00000198018 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44486-201ENSMUST00000198508 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44454-201ENSMUST00000198541 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44314-201ENSMUST00000199263 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44394-201ENSMUST00000199558 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44484-201ENSMUST00000199873 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44466-201ENSMUST00000200264 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm44359-201ENSMUST00000200671 138 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn1aA2APX8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.23■□□□□ 0.35
Scn1aA2APX8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.22■□□□□ 0.35
Scn1aA2APX8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn1aA2APX8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms