Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm37917-201ENSMUST00000194711 392 ntBASIC8.68□□□□□ -1.02
Ubr4A2AN08 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 AC154231.1-201ENSMUST00000220564 2175 ntBASIC8.68□□□□□ -1.02
Ubr4A2AN08 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC8.68□□□□□ -1.02
Ubr4A2AN08 Nudt18-203ENSMUST00000228768 1578 ntBASIC8.68□□□□□ -1.02
Ubr4A2AN08 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm7730-201ENSMUST00000212486 454 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm44855-201ENSMUST00000205725 362 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 AC140397.2-201ENSMUST00000224213 834 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm9194-201ENSMUST00000220749 1447 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 AC131068.2-201ENSMUST00000226175 1453 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Olfr582-201ENSMUST00000098212 960 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 AC126250.1-201ENSMUST00000228343 1768 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Ddx41-204ENSMUST00000224765 2199 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC8.67□□□□□ -1.02
Ubr4A2AN08 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.67□□□□□ -1.02
Ubr4A2AN08 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Ubr4A2AN08 Gm9889-202ENSMUST00000206983 1577 ntBASIC8.66□□□□□ -1.02
Ubr4A2AN08 Gm8131-201ENSMUST00000213783 1570 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms