Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Timm23-208ENSMUST00000226683 750 ntBASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav12-1A0N8R1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trav12-1A0N8R1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav12-1A0N8R1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav12-1A0N8R1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Actl10-202ENSMUST00000226583 1501 ntBASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Mir1199-201ENSMUST00000117015 119 ntBASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav12-1A0N8R1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav12-1A0N8R1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms