Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Gm43799-201ENSMUST00000201845 579 ntBASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv17A0A140T8P8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Gm27000-201ENSMUST00000182943 842 ntBASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv17A0A140T8P8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv17A0A140T8P8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Trbv17A0A140T8P8 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.65□□□□□ -0.39
Trbv17A0A140T8P8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Trbv17A0A140T8P8 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gm13559-201ENSMUST00000120476 863 ntBASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv17A0A140T8P8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms