Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Gm10812-201ENSMUST00000099864 546 ntBASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.44■□□□□ 0.22
Ccdc194A0A140LIT1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Gm27463-201ENSMUST00000183569 57 ntBASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Gm3375-201ENSMUST00000203929 796 ntBASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc194A0A140LIT1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc194A0A140LIT1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc194A0A140LIT1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms