Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm3375-201ENSMUST00000203929 796 ntBASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhgb8A0A140LI48 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm7977-201ENSMUST00000193787 748 ntBASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm30025-201ENSMUST00000218555 728 ntBASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhgb8A0A140LI48 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhgb8A0A140LI48 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhgb8A0A140LI48 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms