Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf7-203ENSMUST00000226565 1971 ntBASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mir5122-201ENSMUST00000175004 89 ntBASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms