Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-78A0A0G2JGN3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-78A0A0G2JGN3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Ighv1-78A0A0G2JGN3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-78A0A0G2JGN3 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-78A0A0G2JGN3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm14859-201ENSMUST00000117752 357 ntBASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm27704-201ENSMUST00000185094 107 ntBASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm7284-201ENSMUST00000131667 944 ntBASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm7367-201ENSMUST00000057611 492 ntBASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-78A0A0G2JGN3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms