Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Flg-201ENSMUST00000050758 1488 ntBASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gm6365-201ENSMUST00000054711 744 ntBASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9d-4A0A0G2JG37 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.33□□□□□ -0.59
Trav9d-4A0A0G2JG37 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC11.33□□□□□ -0.59
Trav9d-4A0A0G2JG37 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gm18284-201ENSMUST00000172604 624 ntBASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9d-4A0A0G2JG37 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms