Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav13n-4A0A0G2JG01 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav13n-4A0A0G2JG01 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav13n-4A0A0G2JG01 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms