Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm12085-201ENSMUST00000119263 940 ntBASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm18958-201ENSMUST00000174258 762 ntBASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav7-1A0A0G2JEV5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm7638-201ENSMUST00000121348 967 ntBASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7-1A0A0G2JEV5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm15378-201ENSMUST00000121894 207 ntBASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7-1A0A0G2JEV5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7-1A0A0G2JEV5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.71□□□□□ -0.38
Trav7-1A0A0G2JEV5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7-1A0A0G2JEV5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7-1A0A0G2JEV5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7-1A0A0G2JEV5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7-1A0A0G2JEV5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav7-1A0A0G2JEV5 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Gm12527-201ENSMUST00000117967 564 ntBASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7-1A0A0G2JEV5 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7-1A0A0G2JEV5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms