Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Haglr-201ENSMUST00000100000 2085 ntBASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gm11539-201ENSMUST00000119837 557 ntBASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gm13436-201ENSMUST00000120418 567 ntBASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gm2274-201ENSMUST00000184539 609 ntBASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-2A0A0G2JDP3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms