Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Flg-201ENSMUST00000050758 1488 ntBASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav4-3A0A0B4J1K1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Nespas-201ENSMUST00000143738 1083 ntBASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm6420-201ENSMUST00000193885 723 ntBASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Prob1-201ENSMUST00000097619 3021 ntBASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Wnt10b-205ENSMUST00000226846 1204 ntBASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav4-3A0A0B4J1K1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Trav4-3A0A0B4J1K1 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav4-3A0A0B4J1K1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Trav4-3A0A0B4J1K1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav4-3A0A0B4J1K1 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trav4-3A0A0B4J1K1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trav4-3A0A0B4J1K1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mir6349-201ENSMUST00000184059 97 ntBASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gm45417-201ENSMUST00000209533 758 ntBASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gm6139-201ENSMUST00000079261 882 ntBASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC11.27□□□□□ -0.61
Trav4-3A0A0B4J1K1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms