Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Gm12644-201ENSMUST00000119935 606 ntBASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv5-43A0A0B4J1J2 Gm43347-201ENSMUST00000200226 580 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms