Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Igkv5-45A0A0B4J1J1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm12644-201ENSMUST00000119935 606 ntBASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm43347-201ENSMUST00000200226 580 ntBASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.79■□□□□ 0.28
Igkv5-45A0A0B4J1J1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms