Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-42A0A0A6YY38 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-42A0A0A6YY38 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-42A0A0A6YY38 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-42A0A0A6YY38 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-42A0A0A6YY38 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm18733-201ENSMUST00000173950 856 ntBASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-42A0A0A6YY38 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-42A0A0A6YY38 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms