Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav21-dv12A0A075B6C4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Odf3b-204ENSMUST00000227834 930 ntBASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav21-dv12A0A075B6C4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.7□□□□□ -0.38
Trav21-dv12A0A075B6C4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm3375-201ENSMUST00000203929 796 ntBASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav21-dv12A0A075B6C4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms