Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Gm11336-201ENSMUST00000118168 334 ntBASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav6-4A0A075B6B4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Gm11355-201ENSMUST00000121120 306 ntBASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav6-4A0A075B6B4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav6-4A0A075B6B4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-4A0A075B6B4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-4A0A075B6B4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-4A0A075B6B4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-4A0A075B6B4 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav6-4A0A075B6B4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav6-4A0A075B6B4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav6-4A0A075B6B4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms