Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav12d-3A0A075B6A4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Mir2861-201ENSMUST00000175539 82 ntBASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav12d-3A0A075B6A4 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav12d-3A0A075B6A4 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.35□□□□□ -0.43
Trav12d-3A0A075B6A4 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms