Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9d-3A0A075B695 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Gm15743-202ENSMUST00000182690 1901 ntBASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Gm21814-202ENSMUST00000203277 873 ntBASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9d-3A0A075B695 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-3A0A075B695 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-3A0A075B695 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Trav9d-3A0A075B695 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-3A0A075B695 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Trav9d-3A0A075B695 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-3A0A075B695 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9d-3A0A075B695 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Gm13216-201ENSMUST00000117145 591 ntBASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 AC107711.5-202ENSMUST00000226429 702 ntBASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9d-3A0A075B695 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms