Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Mir6349-201ENSMUST00000184059 97 ntBASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Gm26524-201ENSMUST00000192339 390 ntBASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav13-2A0A075B649 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Gm42918-201ENSMUST00000199249 1580 ntBASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Gm10138-203ENSMUST00000206952 366 ntBASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Gm4968-201ENSMUST00000071458 858 ntBASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav13-2A0A075B649 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Gm15375-201ENSMUST00000119510 849 ntBASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Gm5408-201ENSMUST00000197998 747 ntBASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav13-2A0A075B649 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav13-2A0A075B649 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms