Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gm11594-201ENSMUST00000122313 162 ntBASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8n-2A0A075B633 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Gm25990-201ENSMUST00000102440 86 ntBASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Gm7230-201ENSMUST00000173026 815 ntBASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8n-2A0A075B633 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8n-2A0A075B633 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8n-2A0A075B633 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8n-2A0A075B633 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8n-2A0A075B633 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Gm13418-201ENSMUST00000119097 944 ntBASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Gm15173-201ENSMUST00000122049 433 ntBASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Gm7506-201ENSMUST00000207758 815 ntBASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav8n-2A0A075B633 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms