Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Gm7638-201ENSMUST00000121348 967 ntBASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Gm27000-201ENSMUST00000182943 842 ntBASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav9n-4A0A075B631 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Gm10653-202ENSMUST00000139570 835 ntBASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Gm20760-201ENSMUST00000179197 648 ntBASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Gm38027-201ENSMUST00000192315 235 ntBASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trav9n-4A0A075B631 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Mir1199-201ENSMUST00000117015 119 ntBASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trav9n-4A0A075B631 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms