Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav4n-4A0A075B615 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Gm13146-201ENSMUST00000118508 780 ntBASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav4n-4A0A075B615 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 AC131586.2-201ENSMUST00000228370 1512 ntBASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav4n-4A0A075B615 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Gm37820-201ENSMUST00000194021 2147 ntBASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 AC154412.1-201ENSMUST00000226540 2786 ntBASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav4n-4A0A075B615 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms