Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MTCO1P40-201ENST00000574371 625 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 MIR5708-201ENST00000579723 85 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AC127024.5-201ENST00000580085 462 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.17□□□□□ -1.42
PDE6BP35913 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.17□□□□□ -1.42
PDE6BP35913 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.17□□□□□ -1.42
PDE6BP35913 AC015871.2-201ENST00000603605 948 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AC011453.2-201ENST00000603737 729 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AL356218.2-201ENST00000605264 187 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AL121757.2-201ENST00000611223 313 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AC090970.3-201ENST00000612566 866 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PDE6BP35913 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.17□□□□□ -1.42
PDE6BP35913 DUXAP9-208ENST00000622815 614 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AC109454.4-201ENST00000623411 649 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AC005618.4-201ENST00000625053 554 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AC127502.3-201ENST00000636170 1206 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 ZNF652P1-201ENST00000442420 1309 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PDE6BP35913 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PDE6BP35913 AC006484.1-201ENST00000435086 1884 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 MTND4P16-201ENST00000466108 1367 ntBASIC6.17□□□□□ -1.42
PDE6BP35913 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.17□□□□□ -1.42
PDE6BP35913 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.17□□□□□ -1.42
PDE6BP35913 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PDE6BP35913 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
PDE6BP35913 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.16□□□□□ -1.42
PDE6BP35913 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PDE6BP35913 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDE6BP35913 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PDE6BP35913 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC6.16□□□□□ -1.42
PDE6BP35913 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.16□□□□□ -1.42
PDE6BP35913 XGY1-201ENST00000381172 446 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 DNAJC19P6-201ENST00000401853 280 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AC114755.2-201ENST00000413520 361 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.16□□□□□ -1.42
PDE6BP35913 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.16□□□□□ -1.42
PDE6BP35913 NUP35P2-201ENST00000416748 943 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 LINC01347-201ENST00000417964 355 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 RPL17P36-201ENST00000420302 549 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AC245054.1-201ENST00000420944 258 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AC004865.1-201ENST00000442276 1003 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 NANOGNBP1-201ENST00000448444 480 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 CEACAMP6-201ENST00000452007 574 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.16□□□□□ -1.42
PDE6BP35913 HMGB1P4-201ENST00000455362 567 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 UBDP1-202ENST00000457888 382 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 RPL7AP52-201ENST00000458096 790 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AL121769.1-201ENST00000469473 401 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 HMGN1P10-201ENST00000474557 553 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
PDE6BP35913 FAM92A1P2-202ENST00000504766 877 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PDE6BP35913 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.16□□□□□ -1.42
PDE6BP35913 AC012339.2-201ENST00000523996 453 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AP001207.1-201ENST00000524051 481 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.16□□□□□ -1.42
PDE6BP35913 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.16□□□□□ -1.42
PDE6BP35913 MIR7853-201ENST00000584820 132 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AL159169.3-201ENST00000608871 561 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AL157786.1-207ENST00000627771 695 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AC099654.5-201ENST00000636479 350 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.16□□□□□ -1.42
PDE6BP35913 MTND5P17-201ENST00000418405 1603 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 AC004817.4-201ENST00000602396 3625 ntBASIC6.16□□□□□ -1.42
PDE6BP35913 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.16□□□□□ -1.42
PDE6BP35913 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.16□□□□□ -1.42
PDE6BP35913 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PDE6BP35913 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.16□□□□□ -1.42
PDE6BP35913 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDE6BP35913 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PDE6BP35913 ELF2P3-201ENST00000445099 1506 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PDE6BP35913 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.15□□□□□ -1.42
PDE6BP35913 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDE6BP35913 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PDE6BP35913 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PDE6BP35913 FGF7P2-201ENST00000332473 296 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 AL590240.1-201ENST00000334118 313 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 OR1L1-202ENST00000373686 1083 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 RNU6-348P-201ENST00000384386 107 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 RNU6-452P-201ENST00000384406 107 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 SNORA70.10-201ENST00000384515 134 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PDE6BP35913 ELOCP19-201ENST00000411919 318 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 RSU1P3-201ENST00000412878 835 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 AC009302.1-201ENST00000417147 390 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.15□□□□□ -1.42
PDE6BP35913 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 OR2B7P-201ENST00000429302 934 ntBASIC6.15□□□□□ -1.42
PDE6BP35913 MTCO2P11-201ENST00000431069 680 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms