Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.4□□□□□ -1.87
UPK1AO00322 AC084757.1-201ENST00000559987 490 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AC009268.1-201ENST00000561352 1203 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 MIR4716-201ENST00000579628 84 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AL049634.3-201ENST00000604968 457 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.4□□□□□ -1.87
UPK1AO00322 AC139769.3-201ENST00000618383 175 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 AC007656.2-201ENST00000624902 4547 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 MFSD8-236ENST00000641509 4050 ntBASIC3.4□□□□□ -1.87
UPK1AO00322 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.4□□□□□ -1.87
UPK1AO00322 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.4□□□□□ -1.87
UPK1AO00322 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.4□□□□□ -1.87
UPK1AO00322 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.39□□□□□ -1.87
UPK1AO00322 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
UPK1AO00322 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
UPK1AO00322 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
UPK1AO00322 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.39□□□□□ -1.87
UPK1AO00322 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 AL138785.1-201ENST00000425821 331 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 HMGB3P5-201ENST00000428894 612 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.39□□□□□ -1.87
UPK1AO00322 RAD1P2-201ENST00000446414 663 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.39□□□□□ -1.87
UPK1AO00322 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.39□□□□□ -1.87
UPK1AO00322 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.39□□□□□ -1.87
UPK1AO00322 AC010468.1-201ENST00000461022 817 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 RPL23AP12-201ENST00000467573 473 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
UPK1AO00322 AC006511.1-201ENST00000470614 315 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 CYCSP20-201ENST00000473154 315 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AC007688.1-201ENST00000475592 759 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AC021205.2-201ENST00000480069 347 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AC020893.1-201ENST00000502452 580 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 UBE2CP3-201ENST00000502715 450 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AC021087.2-201ENST00000504656 1203 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.39□□□□□ -1.87
UPK1AO00322 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.39□□□□□ -1.87
UPK1AO00322 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.39□□□□□ -1.87
UPK1AO00322 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.39□□□□□ -1.87
UPK1AO00322 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.39□□□□□ -1.87
UPK1AO00322 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.39□□□□□ -1.87
UPK1AO00322 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.39□□□□□ -1.87
UPK1AO00322 AC008507.1-201ENST00000587506 734 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.39□□□□□ -1.87
UPK1AO00322 AP004372.1-201ENST00000604842 844 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AL713922.2-201ENST00000619384 716 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 CFTRP2-201ENST00000634304 199 ntBASIC3.39□□□□□ -1.87
UPK1AO00322 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPK1AO00322 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
UPK1AO00322 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC096656.1-201ENST00000623826 1364 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 AC007066.1-201ENST00000392902 381 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 RNA5SP31-201ENST00000411144 127 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPK1AO00322 EIF2S2P3-201ENST00000428356 999 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.38□□□□□ -1.87
UPK1AO00322 AL627224.1-201ENST00000448334 444 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC007967.1-201ENST00000455422 1159 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 RPL7L1P8-201ENST00000469911 741 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 AC091959.2-201ENST00000477363 321 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 MIR2276-201ENST00000516886 89 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 AC008083.2-201ENST00000546707 476 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.38□□□□□ -1.87
UPK1AO00322 AL096803.3-201ENST00000609032 532 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1AO00322 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.38□□□□□ -1.87
UPK1AO00322 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1AO00322 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.38□□□□□ -1.87
UPK1AO00322 AC100871.1-201ENST00000507871 1456 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 AC066616.2-201ENST00000559334 1481 ntBASIC3.38□□□□□ -1.87
UPK1AO00322 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms