Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 USP8P1-201ENST00000494673 3183 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 MAPK10-253ENST00000641010 4072 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 RNU4-7P-201ENST00000364758 141 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AL122016.1-201ENST00000403365 367 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC093084.1-201ENST00000424233 687 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 HSPE1P16-201ENST00000426640 348 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC073063.1-201ENST00000434352 607 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 VN1R25P-201ENST00000443385 738 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC099063.2-201ENST00000446360 662 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 VN1R40P-201ENST00000455196 941 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 BOLA3P3-201ENST00000505182 232 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC103843.2-201ENST00000530523 682 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC139103.1-201ENST00000534696 1030 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 FAM106CP-201ENST00000582212 507 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AL137843.1-201ENST00000605078 385 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC011816.2-201ENST00000607089 556 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 CR589904.2-201ENST00000612533 440 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.55□□□□□ -1.68
SNED1Q8TER0 AP003499.2-201ENST00000624100 483 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC097372.4-201ENST00000625025 466 ntBASIC4.55□□□□□ -1.68
SNED1Q8TER0 AC011266.1-201ENST00000624119 3569 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNED1Q8TER0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNED1Q8TER0 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNED1Q8TER0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNED1Q8TER0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNED1Q8TER0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 MIR128-1-201ENST00000384921 82 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AL035405.1-201ENST00000400795 710 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 RNA5SP296-201ENST00000410523 111 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 OR2X1P-201ENST00000421144 687 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AL589765.3-201ENST00000446084 462 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC022431.1-201ENST00000450941 438 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AP001636.2-201ENST00000525517 696 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC068339.2-201ENST00000534395 618 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC133794.1-201ENST00000602731 914 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AL671309.1-201ENST00000603750 544 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC073111.2-201ENST00000605657 1075 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AP000255.1-201ENST00000610276 676 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AC087683.2-201ENST00000611384 326 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 AP002967.1-201ENST00000624203 539 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.54□□□□□ -1.68
SNED1Q8TER0 MTND2P41-201ENST00000637599 773 ntBASIC4.54□□□□□ -1.68
SNED1Q8TER0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNED1Q8TER0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AL031595.2-201ENST00000624215 19071 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 SNORA63.3-201ENST00000362682 132 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AL136131.1-201ENST00000406079 803 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNED1Q8TER0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 VPS26BP1-201ENST00000417155 755 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 DBIP2-201ENST00000419076 262 ntBASIC4.53□□□□□ -1.68
SNED1Q8TER0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.53□□□□□ -1.68
SNED1Q8TER0 RPL21P6-201ENST00000479171 504 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms