Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.04□□□□□ -1.76
CASP4P49662 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CASP4P49662 AC106871.1-201ENST00000568324 3102 ntBASIC4.04□□□□□ -1.76
CASP4P49662 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
CASP4P49662 AC026951.1-201ENST00000559530 2459 ntBASIC4.03□□□□□ -1.76
CASP4P49662 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.03□□□□□ -1.76
CASP4P49662 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CASP4P49662 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CASP4P49662 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CASP4P49662 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CASP4P49662 AL590290.1-201ENST00000405336 380 ntBASIC4.03□□□□□ -1.76
CASP4P49662 CYCSP19-201ENST00000411715 316 ntBASIC4.03□□□□□ -1.76
CASP4P49662 RPS20P25-201ENST00000412447 352 ntBASIC4.03□□□□□ -1.76
CASP4P49662 HMGB3P20-201ENST00000417997 600 ntBASIC4.03□□□□□ -1.76
CASP4P49662 TCEA1P2-201ENST00000420496 906 ntBASIC4.03□□□□□ -1.76
CASP4P49662 MOB1AP1-201ENST00000430903 535 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.03□□□□□ -1.76
CASP4P49662 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CASP4P49662 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.03□□□□□ -1.76
CASP4P49662 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.03□□□□□ -1.76
CASP4P49662 SETD6P1-201ENST00000444575 317 ntBASIC4.03□□□□□ -1.76
CASP4P49662 DNAJC19P1-201ENST00000455312 319 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.03□□□□□ -1.76
CASP4P49662 RN7SL132P-201ENST00000478131 296 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AP000926.1-201ENST00000479573 241 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AC092045.1-201ENST00000495716 1231 ntBASIC4.03□□□□□ -1.76
CASP4P49662 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.03□□□□□ -1.76
CASP4P49662 AC111193.1-201ENST00000504097 155 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AC020593.1-201ENST00000507399 299 ntBASIC4.03□□□□□ -1.76
CASP4P49662 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CASP4P49662 MTND4LP31-201ENST00000514859 294 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.03□□□□□ -1.76
CASP4P49662 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.03□□□□□ -1.76
CASP4P49662 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CASP4P49662 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.03□□□□□ -1.76
CASP4P49662 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.03□□□□□ -1.76
CASP4P49662 MIR5187-201ENST00000583479 76 ntBASIC4.03□□□□□ -1.76
CASP4P49662 NF1P5-201ENST00000588287 448 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AC079791.1-201ENST00000605356 973 ntBASIC4.03□□□□□ -1.76
CASP4P49662 uc_338.32-201ENST00000615087 172 ntBASIC4.03□□□□□ -1.76
CASP4P49662 AP003072.4-201ENST00000624580 310 ntBASIC4.03□□□□□ -1.76
CASP4P49662 CR392039.4-201ENST00000624968 501 ntBASIC4.03□□□□□ -1.76
CASP4P49662 CFTRP2-201ENST00000634304 199 ntBASIC4.03□□□□□ -1.76
CASP4P49662 RNF6P1-201ENST00000444889 1784 ntBASIC4.03□□□□□ -1.76
CASP4P49662 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CASP4P49662 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CASP4P49662 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CASP4P49662 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CASP4P49662 RNA5SP124-201ENST00000362739 110 ntBASIC4.02□□□□□ -1.77
CASP4P49662 SNORD115-48-201ENST00000364764 76 ntBASIC4.02□□□□□ -1.77
CASP4P49662 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CASP4P49662 AC025750.1-201ENST00000399891 379 ntBASIC4.02□□□□□ -1.77
CASP4P49662 RN7SKP177-201ENST00000410567 355 ntBASIC4.02□□□□□ -1.77
CASP4P49662 CR848007.2-201ENST00000424918 787 ntBASIC4.02□□□□□ -1.77
CASP4P49662 HMGB3P5-201ENST00000428894 612 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CASP4P49662 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.02□□□□□ -1.77
CASP4P49662 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.02□□□□□ -1.77
CASP4P49662 SKP1P1-201ENST00000438081 489 ntBASIC4.02□□□□□ -1.77
CASP4P49662 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.02□□□□□ -1.77
CASP4P49662 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.02□□□□□ -1.77
CASP4P49662 MTND2P8-201ENST00000450555 1025 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AC007688.1-201ENST00000475592 759 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AC091959.2-201ENST00000477363 321 ntBASIC4.02□□□□□ -1.77
CASP4P49662 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.02□□□□□ -1.77
CASP4P49662 AP002812.4-201ENST00000532139 286 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.02□□□□□ -1.77
CASP4P49662 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.02□□□□□ -1.77
CASP4P49662 AC023161.2-201ENST00000551218 780 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AC005242.1-201ENST00000585658 438 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.02□□□□□ -1.77
CASP4P49662 VN1R79P-201ENST00000593540 513 ntBASIC4.02□□□□□ -1.77
CASP4P49662 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CASP4P49662 AC015802.5-201ENST00000607478 399 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AC119674.1-207ENST00000641355 633 ntBASIC4.02□□□□□ -1.77
CASP4P49662 CR381670.1-201ENST00000624291 1693 ntBASIC4.02□□□□□ -1.77
CASP4P49662 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CASP4P49662 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CASP4P49662 GTF2H2B-203ENST00000508065 1432 ntBASIC4.02□□□□□ -1.77
CASP4P49662 AC009501.3-201ENST00000605001 1352 ntBASIC4.02□□□□□ -1.77
CASP4P49662 SAGE2P-201ENST00000420011 2126 ntBASIC4.01□□□□□ -1.77
CASP4P49662 MTND4P31-201ENST00000425607 1343 ntBASIC4.01□□□□□ -1.77
CASP4P49662 ASNSP1-204ENST00000641977 1664 ntBASIC4.01□□□□□ -1.77
CASP4P49662 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CASP4P49662 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.01□□□□□ -1.77
CASP4P49662 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CASP4P49662 OR5T3-201ENST00000303059 1023 ntBASIC4.01□□□□□ -1.77
CASP4P49662 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CASP4P49662 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CASP4P49662 AC007066.1-201ENST00000392902 381 ntBASIC4.01□□□□□ -1.77
CASP4P49662 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.01□□□□□ -1.77
CASP4P49662 FTH1P6-201ENST00000430768 320 ntBASIC4.01□□□□□ -1.77
CASP4P49662 ZNF965P-201ENST00000432501 817 ntBASIC4.01□□□□□ -1.77
CASP4P49662 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.01□□□□□ -1.77
CASP4P49662 HMGB1P16-201ENST00000447155 540 ntBASIC4.01□□□□□ -1.77
CASP4P49662 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
CASP4P49662 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.01□□□□□ -1.77
CASP4P49662 AC104687.1-201ENST00000485829 412 ntBASIC4.01□□□□□ -1.77
CASP4P49662 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CASP4P49662 AC023050.1-201ENST00000498198 304 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms