Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.39□□□□□ -1.87
TNFP01375 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TNFP01375 OR6C71P-202ENST00000641886 1107 ntBASIC3.39□□□□□ -1.87
TNFP01375 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TNFP01375 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
TNFP01375 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.39□□□□□ -1.87
TNFP01375 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TNFP01375 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFP01375 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFP01375 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFP01375 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFP01375 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TNFP01375 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TNFP01375 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.38□□□□□ -1.87
TNFP01375 SNORA9-201ENST00000384215 133 ntBASIC3.38□□□□□ -1.87
TNFP01375 MIR483-201ENST00000385070 76 ntBASIC3.38□□□□□ -1.87
TNFP01375 AC093719.1-202ENST00000392735 373 ntBASIC3.38□□□□□ -1.87
TNFP01375 TAF9BP1-201ENST00000396646 746 ntBASIC3.38□□□□□ -1.87
TNFP01375 RSL24D1P1-201ENST00000404972 493 ntBASIC3.38□□□□□ -1.87
TNFP01375 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFP01375 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.38□□□□□ -1.87
TNFP01375 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.38□□□□□ -1.87
TNFP01375 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFP01375 AC239809.1-201ENST00000450470 217 ntBASIC3.38□□□□□ -1.87
TNFP01375 AC243772.1-201ENST00000451620 410 ntBASIC3.38□□□□□ -1.87
TNFP01375 AL133244.1-201ENST00000456007 258 ntBASIC3.38□□□□□ -1.87
TNFP01375 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFP01375 BX510359.1-201ENST00000456973 237 ntBASIC3.38□□□□□ -1.87
TNFP01375 RN7SL93P-201ENST00000463035 293 ntBASIC3.38□□□□□ -1.87
TNFP01375 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.38□□□□□ -1.87
TNFP01375 RFPL1S-203ENST00000539579 330 ntBASIC3.38□□□□□ -1.87
TNFP01375 AC007424.1-203ENST00000554613 687 ntBASIC3.38□□□□□ -1.87
TNFP01375 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.38□□□□□ -1.87
TNFP01375 AC141257.3-201ENST00000572906 215 ntBASIC3.38□□□□□ -1.87
TNFP01375 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.38□□□□□ -1.87
TNFP01375 AC017076.1-201ENST00000607613 578 ntBASIC3.38□□□□□ -1.87
TNFP01375 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.38□□□□□ -1.87
TNFP01375 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFP01375 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TNFP01375 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.38□□□□□ -1.87
TNFP01375 HSPA8P19-201ENST00000505359 1517 ntBASIC3.38□□□□□ -1.87
TNFP01375 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
TNFP01375 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
TNFP01375 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TNFP01375 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFP01375 AL133412.1-201ENST00000380194 2992 ntBASIC3.37□□□□□ -1.87
TNFP01375 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFP01375 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFP01375 RNA5SP322-201ENST00000363617 119 ntBASIC3.37□□□□□ -1.87
TNFP01375 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TNFP01375 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFP01375 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFP01375 AC005326.1-201ENST00000429197 123 ntBASIC3.37□□□□□ -1.87
TNFP01375 AL353597.2-202ENST00000434901 373 ntBASIC3.37□□□□□ -1.87
TNFP01375 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFP01375 SKP1P1-201ENST00000438081 489 ntBASIC3.37□□□□□ -1.87
TNFP01375 AF228730.2-201ENST00000438784 848 ntBASIC3.37□□□□□ -1.87
TNFP01375 EXTL2P1-201ENST00000446218 416 ntBASIC3.37□□□□□ -1.87
TNFP01375 AC007967.1-201ENST00000455422 1159 ntBASIC3.37□□□□□ -1.87
TNFP01375 EIF2S2P4-201ENST00000461070 984 ntBASIC3.37□□□□□ -1.87
TNFP01375 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFP01375 AC092045.1-201ENST00000495716 1231 ntBASIC3.37□□□□□ -1.87
TNFP01375 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFP01375 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFP01375 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFP01375 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
TNFP01375 DUX4L52-201ENST00000549363 777 ntBASIC3.37□□□□□ -1.87
TNFP01375 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.37□□□□□ -1.87
TNFP01375 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFP01375 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.37□□□□□ -1.87
TNFP01375 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFP01375 uc_338.32-201ENST00000615087 172 ntBASIC3.37□□□□□ -1.87
TNFP01375 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFP01375 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.37□□□□□ -1.87
TNFP01375 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.37□□□□□ -1.87
TNFP01375 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TNFP01375 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
TNFP01375 Z83843.1-201ENST00000604070 3685 ntBASIC3.36□□□□□ -1.87
TNFP01375 SNORA38.1-201ENST00000364172 131 ntBASIC3.36□□□□□ -1.87
TNFP01375 RNU1-89P-201ENST00000384592 164 ntBASIC3.36□□□□□ -1.87
TNFP01375 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFP01375 AC114814.2-201ENST00000419195 485 ntBASIC3.36□□□□□ -1.87
TNFP01375 SEC63P1-201ENST00000425785 1258 ntBASIC3.36□□□□□ -1.87
TNFP01375 AC017083.1-201ENST00000428093 483 ntBASIC3.36□□□□□ -1.87
TNFP01375 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFP01375 AL591503.2-201ENST00000442314 1005 ntBASIC3.36□□□□□ -1.87
TNFP01375 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFP01375 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.36□□□□□ -1.87
TNFP01375 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFP01375 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFP01375 APOOP4-201ENST00000513530 597 ntBASIC3.36□□□□□ -1.87
TNFP01375 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.36□□□□□ -1.87
TNFP01375 NARSP2-201ENST00000518524 679 ntBASIC3.36□□□□□ -1.87
TNFP01375 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.36□□□□□ -1.87
TNFP01375 IGHV3-32-201ENST00000519182 355 ntBASIC3.36□□□□□ -1.87
TNFP01375 OR4R3P-201ENST00000525084 838 ntBASIC3.36□□□□□ -1.87
TNFP01375 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TNFP01375 AC092851.1-201ENST00000535964 478 ntBASIC3.36□□□□□ -1.87
TNFP01375 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms