Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GRIN3BO60391 AL049697.2-201ENST00000403708 294 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 GPS2P1-201ENST00000411761 986 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC6.27□□□□□ -1.41
GRIN3BO60391 MRPS21P3-201ENST00000436696 262 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AL671855.1-201ENST00000446875 1203 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 MTND3P10-201ENST00000450967 341 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 CEACAMP6-201ENST00000452007 574 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AL358832.1-201ENST00000497800 389 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AC105252.1-201ENST00000503089 286 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 RNU6-718P-201ENST00000516166 105 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 HIGD1AP6-201ENST00000521833 279 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.27□□□□□ -1.41
GRIN3BO60391 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.27□□□□□ -1.41
GRIN3BO60391 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AC091489.2-201ENST00000566263 604 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.27□□□□□ -1.41
GRIN3BO60391 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GRIN3BO60391 AP001330.5-201ENST00000607176 411 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 ZYXP1-201ENST00000617638 118 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.27□□□□□ -1.41
GRIN3BO60391 MIR6853-201ENST00000619642 74 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 AC026634.1-201ENST00000634369 198 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 ATE1-AS1-202ENST00000636460 506 ntBASIC6.27□□□□□ -1.41
GRIN3BO60391 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GRIN3BO60391 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GRIN3BO60391 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.27□□□□□ -1.41
GRIN3BO60391 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.27□□□□□ -1.41
GRIN3BO60391 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.27□□□□□ -1.41
GRIN3BO60391 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
GRIN3BO60391 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.27□□□□□ -1.41
GRIN3BO60391 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
GRIN3BO60391 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
GRIN3BO60391 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
GRIN3BO60391 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6.26□□□□□ -1.41
GRIN3BO60391 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
GRIN3BO60391 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.26□□□□□ -1.41
GRIN3BO60391 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.26□□□□□ -1.41
GRIN3BO60391 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 Y_RNA.25-201ENST00000362528 102 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 RNU6-216P-201ENST00000363282 104 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 RNU6-525P-201ENST00000363685 104 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 SNORD113.2-201ENST00000364166 89 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
GRIN3BO60391 SNORA70C-201ENST00000384538 135 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AL590399.2-201ENST00000427536 309 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 AC000111.3-201ENST00000433478 193 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AL831737.1-201ENST00000441288 271 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 RPL7P36-201ENST00000444633 681 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 SLC25A18P1-201ENST00000449385 454 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 snoU13.29-201ENST00000459370 104 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 KLF3P2-201ENST00000465138 268 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.26□□□□□ -1.41
GRIN3BO60391 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.26□□□□□ -1.41
GRIN3BO60391 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.26□□□□□ -1.41
GRIN3BO60391 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.26□□□□□ -1.41
GRIN3BO60391 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC6.26□□□□□ -1.41
GRIN3BO60391 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.26□□□□□ -1.41
GRIN3BO60391 AP000769.2-201ENST00000602344 396 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 AL137072.1-201ENST00000603444 466 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 AC020910.3-201ENST00000603701 874 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 IMMP1LP1-201ENST00000605170 488 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 AL352984.2-202ENST00000613699 155 ntBASIC6.26□□□□□ -1.41
GRIN3BO60391 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
GRIN3BO60391 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms