Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 FO393414.1-201ENST00000428697 1184 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 YWHAEP5-201ENST00000431545 765 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC007389.2-201ENST00000434630 306 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 HSFY3P-201ENST00000444242 1191 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL358232.1-201ENST00000448030 501 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 HMGN1P5-201ENST00000448591 263 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 RPL29P29-201ENST00000448725 423 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 snoU13.7-201ENST00000459220 104 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 RPS17P11-201ENST00000474297 293 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 MTND3P3-201ENST00000505004 126 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 RNA5SP49-201ENST00000516450 115 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC105233.3-201ENST00000531125 744 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC104072.1-201ENST00000568817 668 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 RN7SL622P-201ENST00000585292 275 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC006116.7-201ENST00000590141 756 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AP002906.1-201ENST00000603405 233 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL161729.3-201ENST00000603533 673 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL356121.2-201ENST00000624715 780 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AC025263.3-201ENST00000622965 1396 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHGA1Q9Y5H4 NOL8P1-201ENST00000508336 3529 ntBASIC4.21□□□□□ -1.73
PCDHGA1Q9Y5H4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-207P-201ENST00000384137 107 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU6-1176P-201ENST00000390955 107 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TMSB4XP8-201ENST00000402089 135 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU2-21P-201ENST00000410368 188 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RN7SKP33-201ENST00000410942 340 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC069218.2-201ENST00000411665 344 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TMSB4XP6-201ENST00000415187 135 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 CYP4F29P-201ENST00000420685 446 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC241520.1-201ENST00000422654 1099 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TMSB4XP1-201ENST00000424567 135 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AL513175.1-201ENST00000431492 780 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RPS26P2-201ENST00000440331 348 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AL162151.2-201ENST00000448875 158 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 HMGN3P1-201ENST00000453847 193 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL21P18-201ENST00000469899 480 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RPL7L1P8-201ENST00000469911 741 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC108751.2-201ENST00000469993 231 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AP000893.1-201ENST00000474462 794 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RPS4XP6-201ENST00000477670 797 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC021146.3-201ENST00000511911 260 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 KCTD9P2-201ENST00000512203 1013 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 RNU1-45P-201ENST00000517191 141 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 OR8L1P-201ENST00000534005 955 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC133794.1-201ENST00000602731 914 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC008739.3-201ENST00000603262 127 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 BNIP3P31-201ENST00000604515 566 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC112503.1-201ENST00000608436 391 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 AL138955.1-201ENST00000622881 1040 ntBASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHGA1Q9Y5H4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms