Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL7P53-201ENST00000421245 739 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 AL354692.1-201ENST00000423044 315 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 PTP4A1P7-201ENST00000423476 514 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.41□□□□□ -1.7
LIMK1P53667 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.41□□□□□ -1.7
LIMK1P53667 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 RPS26P40-201ENST00000435209 294 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.41□□□□□ -1.7
LIMK1P53667 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.41□□□□□ -1.7
LIMK1P53667 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.41□□□□□ -1.7
LIMK1P53667 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.41□□□□□ -1.7
LIMK1P53667 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.41□□□□□ -1.7
LIMK1P53667 RPS20P21-201ENST00000466859 343 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC008427.1-201ENST00000503102 655 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 STMN1P2-201ENST00000508435 439 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 PRELID3BP4-201ENST00000515476 571 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.41□□□□□ -1.7
LIMK1P53667 CBX3P5-201ENST00000552017 521 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.41□□□□□ -1.7
LIMK1P53667 AC074029.1-201ENST00000552531 1044 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.41□□□□□ -1.7
LIMK1P53667 AC017100.2-201ENST00000584628 355 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.41□□□□□ -1.7
LIMK1P53667 AC011492.1-201ENST00000600023 315 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 RPL7P50-201ENST00000600588 727 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 AL161756.2-201ENST00000604597 246 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AL158050.2-201ENST00000605336 568 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC099785.1-201ENST00000605697 437 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AL353726.1-201ENST00000614041 1000 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC244100.1-202ENST00000621554 382 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC015804.1-201ENST00000622935 435 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AL356121.2-201ENST00000624715 780 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC092608.3-201ENST00000625017 386 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 AC013437.2-201ENST00000639587 677 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 LINC01808-202ENST00000641680 1116 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
LIMK1P53667 AL359922.3-201ENST00000624779 1670 ntBASIC4.41□□□□□ -1.7
LIMK1P53667 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
LIMK1P53667 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.41□□□□□ -1.7
LIMK1P53667 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LIMK1P53667 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LIMK1P53667 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LIMK1P53667 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LIMK1P53667 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
LIMK1P53667 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LIMK1P53667 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LIMK1P53667 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
LIMK1P53667 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
LIMK1P53667 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LIMK1P53667 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
LIMK1P53667 SNORA70E-201ENST00000384492 135 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 MIR483-201ENST00000385070 76 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AL603865.2-201ENST00000401679 213 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC096533.1-201ENST00000411645 353 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.4□□□□□ -1.71
LIMK1P53667 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.4□□□□□ -1.71
LIMK1P53667 AC018644.1-201ENST00000429934 551 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 RPL7P4-203ENST00000430239 730 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.4□□□□□ -1.71
LIMK1P53667 AL592437.1-201ENST00000443781 492 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.4□□□□□ -1.71
LIMK1P53667 AL929288.2-201ENST00000446368 407 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AL133547.1-201ENST00000448546 220 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 MRPL35P4-201ENST00000453682 566 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AP000873.1-201ENST00000463987 400 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC146507.1-201ENST00000468335 354 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
LIMK1P53667 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.4□□□□□ -1.71
LIMK1P53667 RPS27AP13-201ENST00000498403 237 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.4□□□□□ -1.71
LIMK1P53667 AC146944.2-203ENST00000502493 354 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 SUMO2P5-201ENST00000506790 245 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC090071.1-201ENST00000507713 644 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC139495.1-202ENST00000513164 354 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.4□□□□□ -1.71
LIMK1P53667 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.4□□□□□ -1.71
LIMK1P53667 TRAV8-5-201ENST00000537369 341 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 RFPL1S-203ENST00000539579 330 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC006518.2-201ENST00000542513 940 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 YWHAZP1-201ENST00000556286 722 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.4□□□□□ -1.71
LIMK1P53667 AC027455.1-201ENST00000574104 594 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.4□□□□□ -1.71
LIMK1P53667 AC006116.5-201ENST00000591936 559 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 MIR6867-201ENST00000610636 67 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC018926.3-201ENST00000618841 406 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC007275.1-201ENST00000621243 671 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC039056.2-201ENST00000622261 511 ntBASIC4.4□□□□□ -1.71
LIMK1P53667 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.4□□□□□ -1.71
LIMK1P53667 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.4□□□□□ -1.71
LIMK1P53667 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.4□□□□□ -1.71
LIMK1P53667 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms