Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ACTR3P2-201ENST00000439585 1257 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC022431.1-201ENST00000450941 438 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC092757.1-201ENST00000467293 467 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 RPL21P6-201ENST00000479171 504 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC083982.1-201ENST00000485679 344 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 LARP1BP2-201ENST00000486594 519 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AP001893.2-201ENST00000526949 202 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 HMGN2P47-201ENST00000559378 272 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AP005403.1-201ENST00000579720 229 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC013553.2-201ENST00000604244 589 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AL139286.1-201ENST00000604465 483 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AL035413.2-201ENST00000604801 525 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC243654.2-201ENST00000612843 443 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 AC116563.2-201ENST00000624751 535 ntBASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CSB-PGBD3P0DP91 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 USP9YP13-201ENST00000417797 480 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC083875.1-201ENST00000419509 405 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 CRIP1P1-201ENST00000427567 185 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 RPS11P7-201ENST00000442125 465 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 RPL23AP15-201ENST00000450202 459 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC022364.2-201ENST00000457963 554 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC096576.1-201ENST00000489014 359 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 TRBV5-2-201ENST00000489095 273 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 KLRA1P-201ENST00000503499 986 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 TOMM22P4-201ENST00000511318 336 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 MTND6P2-201ENST00000512226 524 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 MAL2-208ENST00000523307 556 ntTSL 4 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC093027.1-201ENST00000546698 429 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC008687.2-201ENST00000597865 520 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AL513327.3-201ENST00000602618 469 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC115286.1-201ENST00000604298 434 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 FAM25E-202ENST00000608562 189 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AP001521.1-201ENST00000609150 300 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC027807.2-201ENST00000616099 408 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC136475.10-201ENST00000620253 385 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AL160413.1-201ENST00000622780 310 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC091953.3-201ENST00000623220 236 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AL353662.3-201ENST00000625131 237 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 OR55B1P-203ENST00000641518 2602 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 MTND4P27-201ENST00000450813 1354 ntBASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CSB-PGBD3P0DP91 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC016745.2-201ENST00000608834 3443 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AP000547.3-204ENST00000588548 2523 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 OR4G11P-202ENST00000642116 1414 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AL360270.2-201ENST00000562952 5985 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 RN7SKP126-201ENST00000411143 300 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC073264.1-201ENST00000411508 416 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC109780.2-201ENST00000413467 845 ntBASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.3□□□□□ -1.24
CSB-PGBD3P0DP91 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms