Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 PCBP2P3-201ENST00000509726 843 ntBASIC3.23□□□□□ -1.89
SNRNP200O75643 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.23□□□□□ -1.89
SNRNP200O75643 NDUFB9P3-201ENST00000521269 501 ntBASIC3.23□□□□□ -1.89
SNRNP200O75643 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.23□□□□□ -1.89
SNRNP200O75643 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.23□□□□□ -1.89
SNRNP200O75643 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.23□□□□□ -1.89
SNRNP200O75643 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNRNP200O75643 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNRNP200O75643 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 TNPO1P3-201ENST00000436471 2662 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SNRNP200O75643 BX323014.1-201ENST00000412876 237 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.22□□□□□ -1.89
SNRNP200O75643 ATP5C1P1-201ENST00000441945 895 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.22□□□□□ -1.89
SNRNP200O75643 AC006445.1-201ENST00000491925 405 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 WBP1LP4-201ENST00000505043 344 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 UBE2NP1-201ENST00000545592 458 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 CYP2C60P-201ENST00000566088 139 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 AC007179.3-201ENST00000604976 235 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 AL158196.1-201ENST00000616786 434 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 AF117829.1-206ENST00000621883 3802 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.22□□□□□ -1.89
SNRNP200O75643 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.22□□□□□ -1.89
SNRNP200O75643 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
SNRNP200O75643 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.22□□□□□ -1.89
SNRNP200O75643 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.22□□□□□ -1.89
SNRNP200O75643 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 RNA5SP50-201ENST00000363731 107 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 RN7SKP111-201ENST00000410349 271 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.22□□□□□ -1.89
SNRNP200O75643 RPL12P26-201ENST00000452430 487 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNRNP200O75643 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.22□□□□□ -1.89
SNRNP200O75643 AL159169.3-201ENST00000608871 561 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 AC009464.1-201ENST00000615731 469 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.22□□□□□ -1.89
SNRNP200O75643 AC092111.2-201ENST00000611627 1414 ntBASIC3.22□□□□□ -1.89
SNRNP200O75643 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNRNP200O75643 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNRNP200O75643 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNRNP200O75643 MIR200C-201ENST00000384980 68 ntBASIC3.21□□□□□ -1.9
SNRNP200O75643 Z98941.1-201ENST00000407764 100 ntBASIC3.21□□□□□ -1.9
SNRNP200O75643 RPL6P21-201ENST00000418672 846 ntBASIC3.21□□□□□ -1.9
SNRNP200O75643 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.21□□□□□ -1.9
SNRNP200O75643 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.21□□□□□ -1.9
SNRNP200O75643 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.21□□□□□ -1.9
SNRNP200O75643 RNU2-27P-201ENST00000516185 142 ntBASIC3.21□□□□□ -1.9
SNRNP200O75643 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.21□□□□□ -1.9
SNRNP200O75643 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SNRNP200O75643 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SNRNP200O75643 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNRNP200O75643 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNRNP200O75643 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.21□□□□□ -1.9
SNRNP200O75643 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNRNP200O75643 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC063979.1-201ENST00000415539 377 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC091862.1-201ENST00000438016 1100 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 PDSS1P2-201ENST00000449397 678 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 RPL26P28-201ENST00000451325 435 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 RN7SL594P-201ENST00000470590 287 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
SNRNP200O75643 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.2□□□□□ -1.9
SNRNP200O75643 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC122134.1-201ENST00000565664 1104 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC018692.3-201ENST00000623929 123 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNRNP200O75643 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.2□□□□□ -1.9
SNRNP200O75643 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SNRNP200O75643 MTCO1P12-201ENST00000414273 1543 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.2□□□□□ -1.9
SNRNP200O75643 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SNRNP200O75643 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SNRNP200O75643 RNU6-761P-201ENST00000384148 107 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 SNORA9-201ENST00000384215 133 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 RNA5SP31-201ENST00000411144 127 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 AC092641.1-201ENST00000440229 772 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 RPS3AP12-201ENST00000443616 753 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 PRDX3P3-201ENST00000447765 522 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 SETP6-201ENST00000479329 568 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.2□□□□□ -1.9
SNRNP200O75643 AC125494.3-201ENST00000602759 455 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 AC026422.1-201ENST00000623961 452 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 MFSD8-233ENST00000641482 4860 ntBASIC3.2□□□□□ -1.9
SNRNP200O75643 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.2□□□□□ -1.9
SNRNP200O75643 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms