Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTL9Q8NET4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.37□□□□□ -1.71
RTL9Q8NET4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.37□□□□□ -1.71
RTL9Q8NET4 CR392039.4-201ENST00000624968 501 ntBASIC4.37□□□□□ -1.71
RTL9Q8NET4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.37□□□□□ -1.71
RTL9Q8NET4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTL9Q8NET4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RTL9Q8NET4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTL9Q8NET4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTL9Q8NET4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTL9Q8NET4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RTL9Q8NET4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTL9Q8NET4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.36□□□□□ -1.71
RTL9Q8NET4 IFNNP1-201ENST00000429219 553 ntBASIC4.36□□□□□ -1.71
RTL9Q8NET4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.36□□□□□ -1.71
RTL9Q8NET4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.36□□□□□ -1.71
RTL9Q8NET4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.36□□□□□ -1.71
RTL9Q8NET4 AL360157.1-201ENST00000565962 87 ntBASIC4.36□□□□□ -1.71
RTL9Q8NET4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RTL9Q8NET4 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.36□□□□□ -1.71
RTL9Q8NET4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RTL9Q8NET4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.35□□□□□ -1.71
RTL9Q8NET4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTL9Q8NET4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTL9Q8NET4 NCAPGP1-201ENST00000505112 1814 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTL9Q8NET4 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RTL9Q8NET4 AC058791.1-201ENST00000608412 3198 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 RNA5SP502-201ENST00000362694 119 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RTL9Q8NET4 HMGN2P8-201ENST00000391458 268 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RTL9Q8NET4 AL603766.1-201ENST00000407763 664 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.35□□□□□ -1.71
RTL9Q8NET4 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.35□□□□□ -1.71
RTL9Q8NET4 AP006245.1-201ENST00000522549 120 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.35□□□□□ -1.71
RTL9Q8NET4 BRDTP1-201ENST00000605735 677 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 U4.6-201ENST00000621618 127 ntBASIC4.35□□□□□ -1.71
RTL9Q8NET4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.35□□□□□ -1.71
RTL9Q8NET4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTL9Q8NET4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTL9Q8NET4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTL9Q8NET4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RTL9Q8NET4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AP001486.1-201ENST00000463339 476 ntBASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC098799.1-201ENST00000504752 800 ntBASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC010285.3-201ENST00000511668 676 ntBASIC4.34□□□□□ -1.71
RTL9Q8NET4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC005798.1-201ENST00000513715 387 ntBASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC008126.1-201ENST00000549019 480 ntBASIC4.34□□□□□ -1.71
RTL9Q8NET4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.34□□□□□ -1.71
RTL9Q8NET4 AL137843.1-201ENST00000605078 385 ntBASIC4.34□□□□□ -1.71
RTL9Q8NET4 AC011816.2-201ENST00000607089 556 ntBASIC4.34□□□□□ -1.71
RTL9Q8NET4 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RTL9Q8NET4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.34□□□□□ -1.72
RTL9Q8NET4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 NAMPTP1-201ENST00000440465 2514 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTL9Q8NET4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTL9Q8NET4 FRG1CP-201ENST00000358464 769 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 RNU6-984P-201ENST00000363236 109 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 RNU1-89P-201ENST00000384592 164 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 HSPE1P8-201ENST00000406997 288 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 BX323014.1-201ENST00000412876 237 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 AL512649.1-201ENST00000428997 581 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 NPM1P48-201ENST00000436002 853 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC073522.1-201ENST00000483312 377 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 RPS6P4-201ENST00000494693 758 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 MIMT1-201ENST00000597105 1050 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 AC005858.4-201ENST00000623191 700 ntBASIC4.33□□□□□ -1.72
RTL9Q8NET4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RTL9Q8NET4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RTL9Q8NET4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTL9Q8NET4 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RTL9Q8NET4 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 179.1 ms