Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 LINC00561-201ENST00000565815 2738 ntBASIC4.76□□□□□ -1.65
CPEB3Q8NE35 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.76□□□□□ -1.65
CPEB3Q8NE35 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 RNA5SP234-201ENST00000363916 119 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 SNORD56.6-201ENST00000384569 71 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 MIR506-201ENST00000384998 124 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 PPIAP9-201ENST00000403866 498 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AL139128.1-201ENST00000413921 941 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 CHEK2P5-201ENST00000423877 246 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC233728.2-201ENST00000425348 757 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC007742.1-201ENST00000425789 329 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AL158073.1-201ENST00000426848 1104 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 RPS24P8-201ENST00000431490 402 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 ELOCP26-201ENST00000436067 329 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AL450263.2-201ENST00000439400 589 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 RPS11P7-201ENST00000442125 465 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 SPRYD7P1-201ENST00000443861 570 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 PSPHP1-201ENST00000450062 261 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC093824.1-201ENST00000508796 343 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 RNA5SP216-201ENST00000516111 123 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 RNU6-430P-201ENST00000517078 107 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 IGKV2-36-201ENST00000519999 223 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 COX6B1P6-201ENST00000522347 255 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC125612.1-201ENST00000547580 377 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 LSM3P2-201ENST00000551246 273 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC141257.3-201ENST00000572906 215 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 BNIP3P8-201ENST00000597863 560 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AL161729.4-201ENST00000604650 476 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 TUG1_1.1-201ENST00000610654 145 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 uc_338.9-201ENST00000617424 182 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AC093591.3-201ENST00000634516 308 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 TRIM51GP-201ENST00000534741 1350 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 AP002001.2-201ENST00000529025 1469 ntBASIC4.75□□□□□ -1.65
CPEB3Q8NE35 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CPEB3Q8NE35 Z95331.1-201ENST00000623075 23112 ntBASIC4.74□□□□□ -1.65
CPEB3Q8NE35 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 DCAF13P1-201ENST00000495256 1330 ntBASIC4.74□□□□□ -1.65
CPEB3Q8NE35 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 Y_RNA.9-201ENST00000362354 101 ntBASIC4.74□□□□□ -1.65
CPEB3Q8NE35 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.74□□□□□ -1.65
CPEB3Q8NE35 RNU6-761P-201ENST00000384148 107 ntBASIC4.74□□□□□ -1.65
CPEB3Q8NE35 Y_RNA.598-201ENST00000410480 95 ntBASIC4.74□□□□□ -1.65
CPEB3Q8NE35 RNU6-272P-201ENST00000411028 104 ntBASIC4.74□□□□□ -1.65
CPEB3Q8NE35 AC138393.2-201ENST00000414742 246 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms