Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRAMEP78395 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PRAMEP78395 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.69
PRAMEP78395 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRAMEP78395 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PRAMEP78395 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRAMEP78395 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 RNA5SP307-201ENST00000362863 116 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 snoZ40.1-201ENST00000364540 72 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 MIR217-201ENST00000384817 110 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 MIR659-201ENST00000384963 97 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 TMSB4XP8-201ENST00000402089 135 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.46□□□□□ -1.7
PRAMEP78395 RPS20P14-201ENST00000412545 360 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 TMSB4XP6-201ENST00000415187 135 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 RPS3AP37-201ENST00000419176 745 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 EIF4EP1-201ENST00000422311 642 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.46□□□□□ -1.7
PRAMEP78395 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.46□□□□□ -1.7
PRAMEP78395 RPF2P1-201ENST00000424137 906 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 TMSB4XP1-201ENST00000424567 135 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 Z93242.1-201ENST00000427102 353 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 ELOCP6-201ENST00000429066 328 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 Z80107.1-201ENST00000436830 412 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AC093155.1-201ENST00000440164 826 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.46□□□□□ -1.7
PRAMEP78395 ARL2BPP10-201ENST00000446487 531 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AC073264.2-201ENST00000448886 166 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 ZNF886P-201ENST00000450781 723 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.46□□□□□ -1.7
PRAMEP78395 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 ELOCP12-201ENST00000458706 328 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AC134050.1-201ENST00000495088 933 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.46□□□□□ -1.7
PRAMEP78395 AC010460.2-201ENST00000509054 677 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.46□□□□□ -1.7
PRAMEP78395 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.46□□□□□ -1.7
PRAMEP78395 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.46□□□□□ -1.7
PRAMEP78395 OR8G5-201ENST00000524943 1041 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.46□□□□□ -1.7
PRAMEP78395 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.46□□□□□ -1.7
PRAMEP78395 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.46□□□□□ -1.7
PRAMEP78395 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.46□□□□□ -1.7
PRAMEP78395 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.46□□□□□ -1.7
PRAMEP78395 AL160290.3-201ENST00000604869 165 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 Z98200.1-201ENST00000607298 470 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AP005019.3-201ENST00000620418 560 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AL157770.1-201ENST00000623049 439 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 AF001550.2-201ENST00000636643 217 ntBASIC4.46□□□□□ -1.7
PRAMEP78395 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PRAMEP78395 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRAMEP78395 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.46□□□□□ -1.7
PRAMEP78395 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.46□□□□□ -1.7
PRAMEP78395 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRAMEP78395 ERCC6-202ENST00000374127 1782 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 AP005901.5-201ENST00000545779 1796 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRAMEP78395 OR4K15-201ENST00000305051 1216 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 RNA5SP502-201ENST00000362694 119 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 RNU1-85P-201ENST00000364127 164 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 RNU6-906P-201ENST00000384700 70 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 SNORA40.2-201ENST00000390847 128 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 MTCO3P31-201ENST00000405526 789 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 AL136133.1-201ENST00000413694 376 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 Z75741.2-201ENST00000417272 1167 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.45□□□□□ -1.7
PRAMEP78395 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 AC233981.1-201ENST00000423224 461 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.45□□□□□ -1.7
PRAMEP78395 OR4F13P-201ENST00000428478 931 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 SEPT7P5-201ENST00000434048 306 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.45□□□□□ -1.7
PRAMEP78395 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.45□□□□□ -1.7
PRAMEP78395 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRAMEP78395 AL589880.1-201ENST00000448271 287 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PRAMEP78395 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.45□□□□□ -1.7
PRAMEP78395 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.45□□□□□ -1.7
PRAMEP78395 AC005410.1-202ENST00000460347 485 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 RPL21P71-201ENST00000465598 459 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.45□□□□□ -1.7
PRAMEP78395 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.45□□□□□ -1.7
PRAMEP78395 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.45□□□□□ -1.7
PRAMEP78395 VWA8P1-201ENST00000510889 176 ntBASIC4.45□□□□□ -1.7
PRAMEP78395 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.45□□□□□ -1.7
PRAMEP78395 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms