Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 TVP23BP2-201ENST00000455082 615 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 FAM133DP-201ENST00000464802 691 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 EXOC5P1-201ENST00000510543 1969 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 USP9YP5-201ENST00000511770 630 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 RNA5SP179-201ENST00000517284 121 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN18P56856 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN18P56856 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN18P56856 OR5M7P-201ENST00000526140 972 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN18P56856 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.57□□□□□ -1.84
CLDN18P56856 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC244505.7-201ENST00000599675 272 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 AC091167.4-201ENST00000605079 184 ntBASIC3.57□□□□□ -1.84
CLDN18P56856 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLDN18P56856 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.57□□□□□ -1.84
CLDN18P56856 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CLDN18P56856 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CLDN18P56856 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN18P56856 LINC02471-203ENST00000641941 4752 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 HSPA8P19-201ENST00000505359 1517 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLDN18P56856 DDX6P1-205ENST00000441966 1436 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 AC083899.2-201ENST00000423285 1376 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 MIR513A2-201ENST00000385249 127 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 RPL32P23-201ENST00000397237 405 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AC025750.1-201ENST00000399891 379 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 Z86062.1-201ENST00000406773 777 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 MIR1251-201ENST00000408552 70 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN18P56856 RPS15AP40-201ENST00000419621 391 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN18P56856 HIGD1AP4-201ENST00000430194 280 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AL035458.1-201ENST00000433096 585 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN18P56856 RPL7P29-201ENST00000437151 728 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 RPS7P5-201ENST00000441482 581 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN18P56856 AL359073.1-201ENST00000448036 403 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.56□□□□□ -1.84
CLDN18P56856 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.56□□□□□ -1.84
CLDN18P56856 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN18P56856 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN18P56856 OR9N1P-202ENST00000494289 481 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AC025554.1-201ENST00000505641 188 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN18P56856 RPL7L1P13-201ENST00000511702 739 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 NPM1P41-201ENST00000512920 831 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN18P56856 SNORA70.14-201ENST00000516205 110 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 MIR2114-201ENST00000516645 80 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 IGKV2-38-201ENST00000517443 247 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 NDUFA5P2-201ENST00000519723 344 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN18P56856 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN18P56856 NOP56P3-201ENST00000549457 385 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.56□□□□□ -1.84
CLDN18P56856 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.56□□□□□ -1.84
CLDN18P56856 AC015911.5-201ENST00000587076 451 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AC112503.1-201ENST00000608436 391 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 MIR6864-201ENST00000617935 70 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 AC095038.2-201ENST00000621464 1070 ntBASIC3.56□□□□□ -1.84
CLDN18P56856 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
CLDN18P56856 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLDN18P56856 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLDN18P56856 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN18P56856 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN18P56856 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN18P56856 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLDN18P56856 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.55□□□□□ -1.84
CLDN18P56856 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CLDN18P56856 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.55□□□□□ -1.84
CLDN18P56856 OR52E6-202ENST00000379946 954 ntBASIC3.55□□□□□ -1.84
CLDN18P56856 MIR134-201ENST00000385258 73 ntBASIC3.55□□□□□ -1.84
CLDN18P56856 SNORA3C-201ENST00000408792 125 ntBASIC3.55□□□□□ -1.84
CLDN18P56856 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN18P56856 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.55□□□□□ -1.84
CLDN18P56856 TCEA1P4-201ENST00000415066 844 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms