Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.66□□□□□ -1.82
RPA3P35244 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPA3P35244 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPA3P35244 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.65□□□□□ -1.82
RPA3P35244 MIR30E-201ENST00000362104 92 ntBASIC3.65□□□□□ -1.83
RPA3P35244 RNU1-64P-201ENST00000365443 163 ntBASIC3.65□□□□□ -1.83
RPA3P35244 MIR3074-201ENST00000384885 81 ntBASIC3.65□□□□□ -1.83
RPA3P35244 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RPA3P35244 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RPA3P35244 RPL31P52-201ENST00000407532 367 ntBASIC3.65□□□□□ -1.83
RPA3P35244 MTHFD2P2-201ENST00000407725 247 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AL603766.1-201ENST00000407763 664 ntBASIC3.65□□□□□ -1.83
RPA3P35244 RPL17P36-201ENST00000420302 549 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AL139247.1-201ENST00000422768 325 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AL591419.1-201ENST00000427423 339 ntBASIC3.65□□□□□ -1.83
RPA3P35244 HMGB3P5-201ENST00000428894 612 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AC022034.3-201ENST00000471393 478 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AC091959.2-201ENST00000477363 321 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AC093853.1-201ENST00000515689 483 ntBASIC3.65□□□□□ -1.83
RPA3P35244 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
RPA3P35244 IGKV2D-23-201ENST00000518179 286 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.65□□□□□ -1.83
RPA3P35244 AP006245.1-201ENST00000522549 120 ntBASIC3.65□□□□□ -1.83
RPA3P35244 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.65□□□□□ -1.83
RPA3P35244 OR7E13P-201ENST00000526052 910 ntBASIC3.65□□□□□ -1.83
RPA3P35244 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.65□□□□□ -1.83
RPA3P35244 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.65□□□□□ -1.83
RPA3P35244 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AC023161.2-201ENST00000551218 780 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.65□□□□□ -1.83
RPA3P35244 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.65□□□□□ -1.83
RPA3P35244 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC3.65□□□□□ -1.83
RPA3P35244 AC106785.1-201ENST00000565935 262 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.65□□□□□ -1.83
RPA3P35244 AC244505.7-201ENST00000599675 272 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AC012557.1-201ENST00000607115 611 ntBASIC3.65□□□□□ -1.83
RPA3P35244 AL096803.3-201ENST00000609032 532 ntBASIC3.65□□□□□ -1.83
RPA3P35244 RPL23AP61-201ENST00000623642 466 ntBASIC3.65□□□□□ -1.83
RPA3P35244 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.65□□□□□ -1.83
RPA3P35244 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPA3P35244 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.65□□□□□ -1.83
RPA3P35244 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.65□□□□□ -1.83
RPA3P35244 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPA3P35244 AC024560.2-201ENST00000507981 1497 ntBASIC3.65□□□□□ -1.83
RPA3P35244 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPA3P35244 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPA3P35244 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPA3P35244 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.64□□□□□ -1.83
RPA3P35244 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RPA3P35244 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPA3P35244 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.64□□□□□ -1.83
RPA3P35244 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPA3P35244 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.64□□□□□ -1.83
RPA3P35244 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
RPA3P35244 AL445189.1-201ENST00000405722 338 ntBASIC3.64□□□□□ -1.83
RPA3P35244 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.64□□□□□ -1.83
RPA3P35244 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RPA3P35244 AC009965.2-201ENST00000425328 970 ntBASIC3.64□□□□□ -1.83
RPA3P35244 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPA3P35244 AL392003.1-201ENST00000434394 243 ntBASIC3.64□□□□□ -1.83
RPA3P35244 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.64□□□□□ -1.83
RPA3P35244 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.64□□□□□ -1.83
RPA3P35244 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.64□□□□□ -1.83
RPA3P35244 RPS20P21-201ENST00000466859 343 ntBASIC3.64□□□□□ -1.83
RPA3P35244 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.64□□□□□ -1.83
RPA3P35244 AC110768.1-201ENST00000509222 400 ntBASIC3.64□□□□□ -1.83
RPA3P35244 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.64□□□□□ -1.83
RPA3P35244 AC018797.3-201ENST00000513388 1241 ntBASIC3.64□□□□□ -1.83
RPA3P35244 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.64□□□□□ -1.83
RPA3P35244 SCARNA14-201ENST00000516903 136 ntBASIC3.64□□□□□ -1.83
RPA3P35244 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.64□□□□□ -1.83
RPA3P35244 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPA3P35244 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.64□□□□□ -1.83
RPA3P35244 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.64□□□□□ -1.83
RPA3P35244 AC010680.3-201ENST00000604215 520 ntBASIC3.64□□□□□ -1.83
RPA3P35244 AC119674.1-212ENST00000641155 993 ntBASIC3.64□□□□□ -1.83
RPA3P35244 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.64□□□□□ -1.83
RPA3P35244 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPA3P35244 AC068647.1-201ENST00000489539 2265 ntBASIC3.64□□□□□ -1.83
RPA3P35244 AC017002.4-201ENST00000604721 1525 ntBASIC3.64□□□□□ -1.83
RPA3P35244 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPA3P35244 AC087565.3-202ENST00000642085 1603 ntBASIC3.63□□□□□ -1.83
RPA3P35244 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.63□□□□□ -1.83
RPA3P35244 RNU6-55P-201ENST00000411092 107 ntBASIC3.63□□□□□ -1.83
RPA3P35244 RNU6-954P-201ENST00000411355 107 ntBASIC3.63□□□□□ -1.83
RPA3P35244 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RPA3P35244 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RPA3P35244 MTCO1P45-201ENST00000431457 267 ntBASIC3.63□□□□□ -1.83
RPA3P35244 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.63□□□□□ -1.83
RPA3P35244 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.63□□□□□ -1.83
RPA3P35244 UBDP1-202ENST00000457888 382 ntBASIC3.63□□□□□ -1.83
RPA3P35244 AC010401.1-201ENST00000463867 348 ntBASIC3.63□□□□□ -1.83
RPA3P35244 AC007688.1-201ENST00000475592 759 ntBASIC3.63□□□□□ -1.83
RPA3P35244 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.63□□□□□ -1.83
RPA3P35244 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.63□□□□□ -1.83
RPA3P35244 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.63□□□□□ -1.83
RPA3P35244 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms