Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC6P09630 AC092638.1-201ENST00000411966 1275 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXC6P09630 BTF3P9-201ENST00000418784 283 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC6P09630 UBE2V1P1-201ENST00000430836 445 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC6P09630 AL050321.1-201ENST00000432363 400 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 GTF2IP3-201ENST00000433887 494 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXC6P09630 MTND4P32-201ENST00000437189 1237 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC069540.1-201ENST00000446320 988 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC6P09630 AC112492.1-201ENST00000449607 712 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC002553.2-201ENST00000453217 340 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC6P09630 RNA5SP103-201ENST00000459503 118 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC6P09630 HSPD1P11-201ENST00000508643 1702 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC118465.1-201ENST00000513820 1271 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 RFPL4AP5-201ENST00000514977 504 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.76□□□□□ -1.65
HOXC6P09630 DUX4L52-201ENST00000549363 777 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC6P09630 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC6P09630 DUXAP6-201ENST00000553858 601 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC6P09630 HNRNPCP4-201ENST00000571636 900 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC6P09630 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC6P09630 AC112230.1-201ENST00000604342 547 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC6P09630 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC6P09630 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 CR392039.5-201ENST00000623201 510 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HOXC6P09630 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 AP001642.1-201ENST00000624727 2117 ntBASIC4.76□□□□□ -1.65
HOXC6P09630 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC6P09630 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC6P09630 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC6P09630 AL513185.3-201ENST00000433335 1300 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC6P09630 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC6P09630 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HOXC6P09630 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC6P09630 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HOXC6P09630 RNU4-44P-201ENST00000363050 141 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 Y_RNA.169-201ENST00000363745 96 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 RNU4-68P-201ENST00000364314 141 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 SNORD116-12-201ENST00000384468 92 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 MIR1179-201ENST00000408703 91 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC6P09630 ZNF885P-201ENST00000420174 1098 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 NDUFA5P10-201ENST00000432147 357 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.75□□□□□ -1.65
HOXC6P09630 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.75□□□□□ -1.65
HOXC6P09630 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC6P09630 RPL5P13-201ENST00000462840 709 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 RPL6P9-201ENST00000466502 859 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 AC090013.1-201ENST00000485147 480 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 AC104164.2-201ENST00000496953 495 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC010486.3-201ENST00000511602 785 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 RNU6-1028P-201ENST00000517164 93 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 AP003717.3-201ENST00000544832 1180 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 MTND4P33-201ENST00000556706 766 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 DPRXP4-201ENST00000578053 568 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC107982.3-201ENST00000584957 985 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC061975.8-201ENST00000587058 721 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC008759.1-201ENST00000589783 983 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC6P09630 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC6P09630 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 AC010620.1-201ENST00000601088 1102 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 AC024060.1-201ENST00000607052 494 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 SNORD91B-202ENST00000608459 222 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AL353726.1-201ENST00000614041 1000 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC6P09630 AL158062.1-201ENST00000619632 745 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HOXC6P09630 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HOXC6P09630 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC6P09630 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC6P09630 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC6P09630 ZNF876P-202ENST00000398732 1485 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 AC006042.3-201ENST00000454684 1469 ntBASIC4.75□□□□□ -1.65
HOXC6P09630 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC6P09630 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC6P09630 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms