Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.64□□□□□ -1.67
RB1P06400 FTH1P24-201ENST00000503502 462 ntBASIC4.64□□□□□ -1.67
RB1P06400 AC096571.1-202ENST00000506634 735 ntBASIC4.64□□□□□ -1.67
RB1P06400 RNU6-276P-201ENST00000516114 96 ntBASIC4.64□□□□□ -1.67
RB1P06400 SNORA19.3-201ENST00000516165 130 ntBASIC4.64□□□□□ -1.67
RB1P06400 RNA5SP73-201ENST00000516744 108 ntBASIC4.64□□□□□ -1.67
RB1P06400 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.64□□□□□ -1.67
RB1P06400 NDUFS5P6-201ENST00000529136 295 ntBASIC4.64□□□□□ -1.67
RB1P06400 OR5BC1P-201ENST00000529327 739 ntBASIC4.64□□□□□ -1.67
RB1P06400 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.64□□□□□ -1.67
RB1P06400 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
RB1P06400 NIFKP8-201ENST00000560500 874 ntBASIC4.64□□□□□ -1.67
RB1P06400 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RB1P06400 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.64□□□□□ -1.67
RB1P06400 AC245884.10-201ENST00000597355 337 ntBASIC4.64□□□□□ -1.67
RB1P06400 AC008739.3-201ENST00000603262 127 ntBASIC4.64□□□□□ -1.67
RB1P06400 VN1R74P-201ENST00000613259 503 ntBASIC4.64□□□□□ -1.67
RB1P06400 AL353726.1-201ENST00000614041 1000 ntBASIC4.64□□□□□ -1.67
RB1P06400 AL021997.2-201ENST00000615674 271 ntBASIC4.64□□□□□ -1.67
RB1P06400 AC243756.2-201ENST00000618406 463 ntBASIC4.64□□□□□ -1.67
RB1P06400 AC112200.1-201ENST00000625015 234 ntBASIC4.64□□□□□ -1.67
RB1P06400 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RB1P06400 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
RB1P06400 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.64□□□□□ -1.67
RB1P06400 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RB1P06400 AC025263.3-201ENST00000622965 1396 ntBASIC4.64□□□□□ -1.67
RB1P06400 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.64□□□□□ -1.67
RB1P06400 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RB1P06400 Z73965.1-201ENST00000623412 2297 ntBASIC4.63□□□□□ -1.67
RB1P06400 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
RB1P06400 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RB1P06400 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RB1P06400 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RB1P06400 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RB1P06400 RNA5SP130-201ENST00000364431 114 ntBASIC4.63□□□□□ -1.67
RB1P06400 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RB1P06400 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RB1P06400 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RB1P06400 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RB1P06400 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 MFSD13B-201ENST00000420133 1290 ntBASIC4.63□□□□□ -1.67
RB1P06400 OR8F1P-201ENST00000425243 930 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC092634.2-201ENST00000428146 1010 ntBASIC4.63□□□□□ -1.67
RB1P06400 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.63□□□□□ -1.67
RB1P06400 CEACAMP1-201ENST00000434624 1035 ntBASIC4.63□□□□□ -1.67
RB1P06400 PTGES3P1-201ENST00000439531 483 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.63□□□□□ -1.67
RB1P06400 VN1R32P-201ENST00000452234 905 ntBASIC4.63□□□□□ -1.67
RB1P06400 TVP23BP2-201ENST00000455082 615 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC091564.1-201ENST00000464563 479 ntBASIC4.63□□□□□ -1.67
RB1P06400 RPL6P9-201ENST00000466502 859 ntBASIC4.63□□□□□ -1.67
RB1P06400 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RB1P06400 VN1R105P-201ENST00000486595 910 ntBASIC4.63□□□□□ -1.67
RB1P06400 RPS27P23-201ENST00000487608 251 ntBASIC4.63□□□□□ -1.67
RB1P06400 ARL4AP1-201ENST00000503220 705 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC010460.1-201ENST00000507087 466 ntBASIC4.63□□□□□ -1.67
RB1P06400 TPT1P8-201ENST00000510120 555 ntBASIC4.63□□□□□ -1.67
RB1P06400 IFITM8P-201ENST00000522529 394 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC021451.1-201ENST00000523498 1129 ntBASIC4.63□□□□□ -1.67
RB1P06400 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RB1P06400 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.63□□□□□ -1.67
RB1P06400 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 HMGB2P1-201ENST00000591146 634 ntBASIC4.63□□□□□ -1.67
RB1P06400 RPL7P50-201ENST00000600588 727 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC024220.1-201ENST00000603675 484 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC069304.3-201ENST00000603938 1084 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC002487.1-201ENST00000604565 994 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC073387.2-201ENST00000604797 784 ntBASIC4.63□□□□□ -1.67
RB1P06400 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 AC022106.2-201ENST00000620114 757 ntBASIC4.63□□□□□ -1.67
RB1P06400 AP006248.2-201ENST00000623309 592 ntBASIC4.63□□□□□ -1.67
RB1P06400 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
RB1P06400 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
RB1P06400 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.63□□□□□ -1.67
RB1P06400 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.63□□□□□ -1.67
RB1P06400 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RB1P06400 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.62□□□□□ -1.67
RB1P06400 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RB1P06400 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RB1P06400 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RB1P06400 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RB1P06400 AC138393.1-206ENST00000540997 1886 ntBASIC4.62□□□□□ -1.67
RB1P06400 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.62□□□□□ -1.67
RB1P06400 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RB1P06400 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RB1P06400 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
RB1P06400 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
RB1P06400 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
RB1P06400 OR10J6P-201ENST00000289731 930 ntBASIC4.62□□□□□ -1.67
RB1P06400 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RB1P06400 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
RB1P06400 SNORA70.4-201ENST00000365509 134 ntBASIC4.62□□□□□ -1.67
RB1P06400 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.62□□□□□ -1.67
RB1P06400 MIR200C-201ENST00000384980 68 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms