Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 MIR4504-201ENST00000577413 92 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 MIR4509-3-201ENST00000578671 94 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 MIR4509-2-201ENST00000583920 94 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RN7SL52P-201ENST00000584271 284 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RPAP2P1-201ENST00000603626 1168 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC002487.1-201ENST00000604565 994 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AL049634.3-201ENST00000604968 457 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC112220.2-201ENST00000605513 533 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AL133243.1-201ENST00000614487 366 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 CYCSP41-201ENST00000616920 296 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RN7SL722P-201ENST00000617780 284 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 MIR4509-1-201ENST00000618224 94 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RN7SL565P-201ENST00000618246 284 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 VN1R7P-201ENST00000619242 903 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 AC023510.2-201ENST00000622162 746 ntBASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NUP54Q7Z3B4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.21□□□□□ -1.73
NUP54Q7Z3B4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NUP54Q7Z3B4 SEPT7P7-201ENST00000420492 1301 ntBASIC4.21□□□□□ -1.73
NUP54Q7Z3B4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
NUP54Q7Z3B4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
NUP54Q7Z3B4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
NUP54Q7Z3B4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.21□□□□□ -1.73
NUP54Q7Z3B4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RNA5SP189-201ENST00000364920 115 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RNU6-398P-201ENST00000384143 109 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AL121834.1-202ENST00000404494 277 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RNU6-584P-201ENST00000410350 95 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RPL31P2-201ENST00000413849 377 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 MTND4P3-201ENST00000417829 541 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RPL21P91-201ENST00000429231 479 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC234064.1-201ENST00000436312 247 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC011753.3-201ENST00000443436 406 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RN7SL354P-201ENST00000469282 294 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 PRDX3P4-201ENST00000470828 747 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 GAPDHP36-201ENST00000480688 918 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RN7SL817P-201ENST00000480777 288 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC008897.1-201ENST00000494006 347 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC078918.1-201ENST00000498515 228 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 TRAV31-201ENST00000502780 342 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC005921.1-201ENST00000510589 286 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 TCP11X3P-202ENST00000514289 1254 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RNA5SP446-201ENST00000515955 82 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RFPL1S-203ENST00000539579 330 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 CR383656.6-201ENST00000550518 394 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 CBX3P5-201ENST00000552017 521 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 NIFKP8-201ENST00000560500 874 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 MIR4700-201ENST00000578311 74 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 RN7SL339P-201ENST00000580597 296 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC090616.5-202ENST00000582111 297 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC234771.5-201ENST00000600161 514 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC024060.1-201ENST00000607052 494 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 MIR6820-201ENST00000611508 62 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC005086.4-201ENST00000623065 213 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC109454.4-201ENST00000623411 649 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 MTND4P26-201ENST00000415971 1359 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC111188.2-201ENST00000529697 1387 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 MARK2P15-201ENST00000432204 2186 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 OR56B2P-202ENST00000641377 2453 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 AC106754.1-201ENST00000562632 1513 ntBASIC4.21□□□□□ -1.74
NUP54Q7Z3B4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NUP54Q7Z3B4 AL592148.3-201ENST00000608771 2646 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms