Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
LMX1BO60663 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
LMX1BO60663 CASC19-204ENST00000641001 2055 ntBASIC4.06□□□□□ -1.76
LMX1BO60663 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 DHX40P1-201ENST00000588725 1412 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC093775.1-201ENST00000624154 1868 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 OR56B2P-201ENST00000317102 954 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 RNU6-707P-201ENST00000364647 95 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 Y_RNA.465-201ENST00000384293 102 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 RNU6-452P-201ENST00000384406 107 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 RN7SKP167-201ENST00000411047 285 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC114755.2-201ENST00000413520 361 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 RPL17P36-201ENST00000420302 549 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 RPS27AP7-201ENST00000422792 455 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 OR5AW1P-201ENST00000426334 1006 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 DPY19L1P2-201ENST00000426647 915 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 GTF2IP7-202ENST00000436677 309 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 AL353093.1-201ENST00000441292 436 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 MTCYBP3-201ENST00000445588 1137 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 ARL2BPP10-201ENST00000446487 531 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC092754.2-201ENST00000463506 460 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 BZW1P2-201ENST00000473537 826 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 RPL12P20-201ENST00000475538 479 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC008837.2-201ENST00000513076 418 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 ELOCP32-201ENST00000548625 324 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.05□□□□□ -1.76
LMX1BO60663 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.05□□□□□ -1.76
LMX1BO60663 RN7SL690P-201ENST00000582087 240 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 AC004987.4-201ENST00000603383 338 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC064872.1-201ENST00000604823 1072 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC010738.1-201ENST00000604970 987 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC092653.1-201ENST00000608509 531 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 STMN1P1-201ENST00000617809 440 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC068792.1-201ENST00000621354 417 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 Z69908.1-201ENST00000622603 247 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 AC109454.4-201ENST00000623411 649 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 CR381572.2-201ENST00000624852 397 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 SEC63P2-201ENST00000503863 1939 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
LMX1BO60663 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
LMX1BO60663 MAPK10-320ENST00000641462 6696 ntBASIC4.05□□□□□ -1.76
LMX1BO60663 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.04□□□□□ -1.76
LMX1BO60663 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.04□□□□□ -1.76
LMX1BO60663 AP001273.1-201ENST00000624493 3152 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.04□□□□□ -1.76
LMX1BO60663 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMX1BO60663 AP000776.1-201ENST00000530032 1663 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMX1BO60663 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMX1BO60663 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LMX1BO60663 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LMX1BO60663 Y_RNA.77-201ENST00000362962 107 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 Y_RNA.194-201ENST00000363985 102 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 RNA5SP151-201ENST00000365632 117 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 OR1L1-202ENST00000373686 1083 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 RNU6-532P-201ENST00000384318 107 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 RNU6-185P-201ENST00000384421 107 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 MIR137-201ENST00000385223 102 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LMX1BO60663 RPS3AP26-201ENST00000398259 784 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 RNU6-757P-201ENST00000410334 100 ntBASIC4.04□□□□□ -1.76
LMX1BO60663 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms