Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 AC062016.1-201ENST00000355719 319 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 AL357075.1-201ENST00000404107 726 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 SAGE2P-201ENST00000420011 2126 ntBASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
CSMD1Q96PZ7 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AL035458.1-201ENST00000433096 585 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 RPS29P26-201ENST00000477483 171 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 RSL24D1P4-201ENST00000400938 484 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 SETP9-201ENST00000423837 832 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC099563.1-201ENST00000456086 418 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 RNU4-29P-201ENST00000515943 174 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC100793.4-201ENST00000613683 429 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC069209.1-201ENST00000619282 651 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC241585.2-209ENST00000638217 143 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 TNPO1P3-201ENST00000436471 2662 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 RN7SKP111-201ENST00000410349 271 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 RPS21P8-201ENST00000413365 247 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 MYL8P-204ENST00000431574 518 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC069285.2-201ENST00000440210 275 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC239809.1-201ENST00000450470 217 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC109925.1-201ENST00000478069 331 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 RPS29P21-201ENST00000496272 170 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC023161.2-201ENST00000551218 780 ntBASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CSMD1Q96PZ7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 ATP5F1P6-201ENST00000402768 767 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 TRBV12-1-201ENST00000479785 344 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 MIR4435-1-201ENST00000582552 80 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC018692.3-201ENST00000623929 123 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 MTCO1P9-201ENST00000505577 1534 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AL645568.2-201ENST00000432815 1337 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 RNA5SP52-201ENST00000362448 134 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 snoU13.23-201ENST00000458863 104 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 snoU13.26-201ENST00000459452 105 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC128713.1-201ENST00000471495 306 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 RNA5SP356-201ENST00000515972 94 ntBASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 TBCA-206ENST00000518338 551 ntTSL 2 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CSMD1Q96PZ7 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms