Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AP000676.4-201ENST00000624659 623 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC087190.4-201ENST00000574616 8334 ntBASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SLC44A1Q8WWI5 AC097504.1-201ENST00000515103 2415 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 RNVU1-6-201ENST00000364688 164 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 RNA5SP397-201ENST00000391323 118 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 RNU2-6P-201ENST00000411404 190 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 RBMY1KP-201ENST00000423480 476 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 ELOCP18-201ENST00000434209 337 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC092013.1-201ENST00000438795 332 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 RPS7P5-201ENST00000441482 581 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 YWHAQP9-201ENST00000445891 512 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AL121877.1-201ENST00000453704 622 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 RPL23AP44-201ENST00000482216 473 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC073522.1-201ENST00000483312 377 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC108145.1-201ENST00000503770 153 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AP000827.1-201ENST00000527814 258 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC113368.1-201ENST00000603736 382 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC009237.15-201ENST00000610252 501 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AL161616.1-201ENST00000611867 286 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC009159.2-201ENST00000617603 606 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 AC097655.1-201ENST00000635075 318 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 OR6C71P-202ENST00000641886 1107 ntBASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SLC44A1Q8WWI5 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC022031.1-201ENST00000585985 2593 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC011155.1-201ENST00000316512 456 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 RNA5SP388-201ENST00000362584 119 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 RNU4-92P-201ENST00000363783 136 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 Y_RNA.472-201ENST00000384322 102 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 MIR513B-201ENST00000385136 84 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 RPF2P1-201ENST00000424137 906 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 HMGB1P45-201ENST00000435986 653 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 ELOCP8-201ENST00000439309 332 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 EEF1A1P39-201ENST00000440791 250 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 ELOCP15-201ENST00000442090 332 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 RPL36AP15-201ENST00000444514 266 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC004022.1-201ENST00000447766 1066 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 RPL23AP71-201ENST00000470966 469 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC112673.1-201ENST00000513168 575 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 IGKV2-36-201ENST00000519999 223 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC008562.1-201ENST00000521763 330 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 AC063949.1-201ENST00000552900 865 ntBASIC4.37□□□□□ -1.71
SLC44A1Q8WWI5 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms